Change chunk size

fftma_module/gen/lib_src/chunk_array.c

@@ -4,6 +4,11 @@
 
 #define MAX_CHUNK_SIZE 2048*2048
 
+int min(int value1, int value2) {
+    if (value1 < value2) return value1;
+    return value2;
+}
+
 int get_mod(chunk_array_t* chunk_array,int init_pos) {
     int mod;
     if (chunk_array->total_size - init_pos > chunk_array->chunk_size ) {
@@ -53,12 +58,12 @@ void buffer_update(chunk_array_t* chunk_array, buffer_t* buffer, size_t pos) {
     fread(buffer->data, sizeof(double), chunk_array->chunk_size, chunk_array->fp);
 }
 
-buffer_t* buffer_create() {
+buffer_t* buffer_create(int size) {
     buffer_t * buffer = (buffer_t*)malloc(sizeof(buffer_t));
 
     if (buffer == NULL) return NULL;
 
-    buffer->data = malloc(MAX_CHUNK_SIZE * sizeof(double));
+    buffer->data = malloc(size * sizeof(double));
 
     if (buffer->data == NULL) {
         free(buffer);
@@ -88,7 +93,9 @@ chunk_array_t* chunk_array_create(char* filename, size_t total_size) {
         }
     }
 
-    chunk_array->buffer1 = buffer_create();
+    chunk_array->chunk_size = min(MAX_CHUNK_SIZE, total_size);
+
+    chunk_array->buffer1 = buffer_create(chunk_array->chunk_size);
 
     if (chunk_array->buffer1 == NULL) {
         fclose(chunk_array->fp);
@@ -96,7 +103,7 @@ chunk_array_t* chunk_array_create(char* filename, size_t total_size) {
         return NULL;
     }
 
-    chunk_array->buffer2 = buffer_create();
+    chunk_array->buffer2 = buffer_create(chunk_array->chunk_size);
 
     if (chunk_array->buffer2 == NULL) {
         fclose(chunk_array->fp);
@@ -105,13 +112,12 @@ chunk_array_t* chunk_array_create(char* filename, size_t total_size) {
         return NULL;
     }
 
-    fread(chunk_array->buffer1->data, sizeof(double), MAX_CHUNK_SIZE, chunk_array->fp);
+    fread(chunk_array->buffer1->data, sizeof(double), chunk_array->chunk_size, chunk_array->fp);
     chunk_array->buffer1->init_pos = 0;
-    fread(chunk_array->buffer2->data, sizeof(double), MAX_CHUNK_SIZE, chunk_array->fp);
+    fread(chunk_array->buffer2->data, sizeof(double), chunk_array->chunk_size, chunk_array->fp);
-    chunk_array->buffer2->init_pos = MAX_CHUNK_SIZE;
+    chunk_array->buffer2->init_pos = chunk_array->chunk_size;
     
     chunk_array->filename = filename;
-    chunk_array->chunk_size = MAX_CHUNK_SIZE;
     chunk_array->total_size = total_size;
     return chunk_array;
 }